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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905489.1_cds_XP_016455742.1_49638
CDS Infomation

[gene=LOC107779770] [db_xref=GeneID:107779770] [protein=pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like] [protein_id=XP_016455742.1] [location=join(16236..16272,16365..16706,18369..18530,18647..18768,19160..19213,19349..19455,19539..19644,19954..20017,20171..20259,21174..21305,21502..21672,22277..22392,22524..22635,22735..22819,23619..23663,23788..23856,24329..24405)] [gbkey=CDS]
Sequence

ATGGGCAAATTACAATATGGAAATTACGACCCGGCAGATAAGTTCAAAAAGGGCATTCAA
ATCATAACCTCCATAACTAACTCTCCACTTTCTACGAATTCGCTTAAAAACCCTTCAAAT
TTCTCACATCTCGCATCTTCTCCTTCTCGGCACGCAGATAACACACACACACACACACAT
ATTTGCAGAGGATTAGTTAAGCACACAAGAGGAAAAATGGCAGCAACAGCAAAAGCAGCA
GCAAAGCCAGGACGATCGACTTCGGCGTACAGCGAAGTCCAAAGCAACCGTCTCATTGTA
TCGCTTCCTCTTCCTTCCGTTCTCAAAAATCCATTTTCTGTCGTTGATGGCCCCCCTAGT
TCTGCCGCTGGAAATCCAGGTGAAATTGCAAAGCTTTTCCCAAATCTGTTTGGGCAGCCT
TCCGTGTCGTTACTGCCAGGTCACACATCAGGAGCTGCATTGAATCATAATCTTAAAATC
GGGGTTGTATTGTCTGGAGGACAGGCACCTGGTGGGCACAATGTCATCTCTGGAATTTTT
GATTATTTGCAGGAGAAAACGAAAGGTAGCACACTCTATGGATTTAGGGGAGGTCCAGCA
GGAATAATGAACTGTAAATATGTAGAGTTGACAGCGGATTTCGTTTATCCTTACAGAAAT
CAAGGTGGTTTTGATATGATCGCTAGTGGTAGAGACAAGATAGAAACCGATGAACAGTTC
AAACAAGCTGCAGAAACAGCTAAGAAACTTGACTTAGATGGGATAGTTGTGATTGGCGGA
GATGATTCAAACACGAATGCTTGTCTTCTAGCTGAGAACTTCAGGGGTAAAGGCTTTAAA
ACTCGGGTTATTGGATGCCCAAAGACAATTGATGGTGATTTGAAATGCAAAGAAGTTCCT
ACTAGTTTCGGATTTGATACTGCTTGCAAGATATATGCAGAAATGATTGGAAATGTCATG
ATAGATGCGCGTTCAACAGGAAAATACTATCACTTTGTAAGGCTTATGGGTCGTGCTGCA
TCACACATCACATTGGAGTGTGCTCTACAGACGCATTCGAACATTACCATCATCGGTGAA
GAGGTCGCAGCTCAGAAGCAAACACTTAAAAGTGTTACAGATTATATCGTAGGAGTAATC
TGCAAACGTGCAAAACTTGGCTATAATTATGGGGTTATACTAATACCCGAAGGCTTGATT
GACTTCATCCCAGAGGTGCAACAGTTGATTGCAGAGCTCAATGAAATACTGGCTAATGAT
GTTATTGATGAAGGTGGCAATTGGAAAAAGAAGCTCAGAAGCCAGTCTCATGAGCTCTTC
GAATTCCTACCACAAGCAATTCAGGAGCAGTTACTTCTTGAAAGAGATCCACATGGAAAT
GTCCAGGTTGCCAAAATAGAAACCGAGAAAATGCTTATTCAAATGGTGGAAGCTGAACTG
GAGAACAAGAGGAAGGAAGGTTCTTATACCAAACATTTTAAAGGGCAGTCTCATTTTTTC
GGTTATGAGGGCAGATGTGGTTTGCCTTCGAGTTTTGACTCCAACTATTGCTATGCATTG
GGTTACGGGGCTGGAGCACTTCTTCATTCAGGAAAAACAGGCTTGATTTCCTCGGTGGGA
AATTTGGGAGCTCCAGTTGAAGACTGGACTGTAGGTGGAACAGCACTAACATCATTGATG
GATGTGGAAAGGAGACATGGTAAGTTCAAGCCTGTGATTAAGAAGGCAATGGTGGAATTA
GATGGTGCTCCTTTCAAAAAATTTGCTTCCTTGCGAGAAGAGTGGGCTCTAAAGAATCGA
TACTTTAGCCCTGGTCCACTTCAATTTGTCGGCCCAACATCAAATGAAATCAATCACACT
TTAATGCTGGAGTTGGGAGCCAAAGCTTAA

Peptide Sequence

PEP ID

XP_016455742.1
PEP Infomation

PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like [Nicotiana tabacum]
Sequence

MGKLQYGNYDPADKFKKGIQIITSITNSPLSTNSLKNPSNFSHLASSPSRHADNTHTHTH
ICRGLVKHTRGKMAATAKAAAKPGRSTSAYSEVQSNRLIVSLPLPSVLKNPFSVVDGPPS
SAAGNPGEIAKLFPNLFGQPSVSLLPGHTSGAALNHNLKIGVVLSGGQAPGGHNVISGIF
DYLQEKTKGSTLYGFRGGPAGIMNCKYVELTADFVYPYRNQGGFDMIASGRDKIETDEQF
KQAAETAKKLDLDGIVVIGGDDSNTNACLLAENFRGKGFKTRVIGCPKTIDGDLKCKEVP
TSFGFDTACKIYAEMIGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHSNITIIGE
EVAAQKQTLKSVTDYIVGVICKRAKLGYNYGVILIPEGLIDFIPEVQQLIAELNEILAND
VIDEGGNWKKKLRSQSHELFEFLPQAIQEQLLLERDPHGNVQVAKIETEKMLIQMVEAEL
ENKRKEGSYTKHFKGQSHFFGYEGRCGLPSSFDSNYCYALGYGAGALLHSGKTGLISSVG
NLGAPVEDWTVGGTALTSLMDVERRHGKFKPVIKKAMVELDGAPFKKFASLREEWALKNR
YFSPGPLQFVGPTSNEINHTLMLELGAKA

Transcript Sequence

Gene sequence data has not been registered.